Molecular modelling

Discovering chemical properties by physical simulations

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We include updates on CPK coloring, Folding@home, Coarse-grained modeling, Rosetta@home, AutoDock, Ball-and-stick model, Katchalski-Katzir algorithm, Protein–ligand docking, Accessible surface area, Space-filling model, Statistical potential, Implicit solvation, Scoring functions for docking, Searching the conformational space for docking, Gaussian network model, Biskit ... and more.

2020
Sergey Piletsky
Filed patent for Methods and Kits for determining binding sites, with co-inventors Elena Piletska, Francesco Canfarotta, and Don Jones.
April 12 2020
Folding@home
Folding@home becomes the world's first exaflop computing system, reaching a peak performance of 2.43 exaflops.
March 2020
Folding@home
Folding@home launched a program to assist researchers worldwide in studying the coronavirus pandemic, initially focusing on simulating potentially druggable protein targets from SARS-CoV-2 and SARS-CoV viruses.
March 2020
Folding@home
Project achieves a computing speed of approximately 1.22 exaflops, driven by heightened interest during the COVID-19 pandemic.
March 25 2020
Folding@home
Folding@home reached 768 petaFLOPS, or 1.5 x86 exaFLOPS, becoming the first exaFLOP computing system.
March 20 2020
Folding@home
Folding@home announced via Twitter that it was running with over 470 native petaFLOPS, equivalent to 958 x86 petaFLOPS, due to increased participation during the coronavirus pandemic.
2019
Sergey Piletsky
Filed patent for Electrochemical Sensor, with co-inventors Omar Sheej Ahamad and Alvaro Garcia Cruz.
June 2019
Folding@home
The Folding@home web client was permanently shut down due to the phasing out of NaCl and internal changes at the organization.
February 16 2018
Folding@home
The Folding@home Android client, developed in cooperation with Sony, was removed from Google Play. The project simultaneously announced plans to develop an open-source alternative in the future.
May 11 2016
Folding@home
Folding@home announced it was moving towards reaching the 100 x86 petaFLOPS mark.
July 2015
Folding@home
Folding@home released its first Android mobile client on Google Play, compatible with devices running Android 4.4 KitKat or newer versions.
2014
Folding@home
Folding@home released a client for Google Chrome and Chromium web browsers, enabling users to run distributed computing tasks directly in their web browsers using Google's Native Client (NaCl) technology.
2014
Sergey Piletsky
Filed patent for Photoreactor and Process for Preparing MIP Nanoparticles, with co-inventors Olena Piletska, Antonio Guerreiro, Michael Whitcombe, and Alessandro Poma.
September 9 2013
Folding@home
Folding@home reached nine native petaFLOPS, with 17.9 x86 petaFLOPS.
June 21 2013
Folding@home
Folding@home reached eight native petaFLOPS.
May 2013
Folding@home
Folding@home attained over seven native petaFLOPS, with the equivalent of 14.87 x86 petaFLOPS.
2012
TeraChem
Publications on nanotechnology, fullerenes, and molecular dynamics simulations, expanding the computational chemistry research scope.
2011
Folding@home
Folding@home began simulations of the dynamics of the HIV enzyme RNase H, with the goal of designing drugs to deactivate this key viral component.
2011
TeraChem
Multiple publications exploring advanced computational chemistry techniques, including charge transfer in solvated proteins, excited-state electronic structure, and electron repulsion integral evaluation on GPUs.
November 10 2011
Folding@home
Folding@home's performance exceeded six native petaFLOPS, with the equivalent of nearly eight x86 petaFLOPS.
2010
Sergey Piletsky
Filed patent for Rationally Designed Selective Binding Polymers, with co-inventors Olena Piletska, Khalku Karim, Coulton H. Legge, and Sreenath Subrahmanyam.

This contents of the box above is based on material from the Wikipedia articles TeraChem, Folding@home & Sergey Piletsky, which are released under the Creative Commons Attribution-ShareAlike 4.0 International License.

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